WormBase Tree Display for Variation: WBVar00277287

WBVar00277287 Evidence: Paper_evidence: WBPaper00036200
  Name: Public_name: ok5170
    Other_name: ZK899.8k.1:c.524-86G>A
      ZK899.8i.2:c.-680-86G>A
      ZK899.8i.3:c.-680-86G>A
      ZK899.8a.1:c.524-86G>A
      ZK899.8c.1:c.620-86G>A
      ZK899.8e.1:c.47-86G>A
      ZK899.8b.1:c.353-86G>A
      ZK899.8d.1:c.254-86G>A
      ZK899.8h.1:c.107-86G>A
    HGVSg: CHROMOSOME_X:g.9496455G>A
  Sequence_details: SMap: S_parent: Sequence: T19C11
    Flanking_sequences: AAACCGGCACTGGTAGACAACAGTGCACAG GGCCAAAAAGGTTAAACTTGATGTAGATAT
    Mapping_target: T19C11
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00033304
    Laboratory: RB
    Person: WBPerson46
    Analysis: Million_Mutation_Pilot_Project
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00001516
    Transcript: ZK899.8a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: ZK899.8a.1:c.524-86G>A
        Intron_number: 4/19
      ZK899.8h.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: ZK899.8h.1:c.107-86G>A
        Intron_number: 2/18
      ZK899.8i.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: ZK899.8i.2:c.-680-86G>A
        Intron_number: 1/18
      ZK899.8e.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: ZK899.8e.1:c.47-86G>A
        Intron_number: 2/16
      ZK899.8c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: ZK899.8c.1:c.620-86G>A
        Intron_number: 2/17
      ZK899.8b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: ZK899.8b.1:c.353-86G>A
        Intron_number: 3/19
      ZK899.8i.3 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: ZK899.8i.3:c.-680-86G>A
        Intron_number: 1/18
      ZK899.8k.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: ZK899.8k.1:c.524-86G>A
        Intron_number: 4/19
      ZK899.8d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: ZK899.8d.1:c.254-86G>A
        Intron_number: 1/16
  Isolation: Mutagen: EMS
  Reference: WBPaper00036200
  Remark: Allele identified through whole-genome sequencing by the Gene Knockout Consortium Paper_evidence: WBPaper00036200
    Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele