WormBase Tree Display for Variation: WBVar00277326

WBVar00277326 Evidence: Paper_evidence: WBPaper00036200
  Name: Public_name: ok5942
    Other_name: CE16442:p.Ser316Phe
      F16H9.2b.1:c.34+16547G>A
      F16H9.2a.1:c.-24+16547G>A
      T22H6.4.1:c.947C>T
    HGVSg: CHROMOSOME_X:g.12791669C>T
  Sequence_details: SMap: S_parent: Sequence: T22H6
    Flanking_sequences: TTCGATATTTTGTCTTTTGCCGTTCAGAAT TTCGTATGTATCATCTGCACTTTCATTAAC
    Mapping_target: T22H6
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00033306
    Laboratory: RB
    Person: WBPerson46
    Analysis: Million_Mutation_Pilot_Project
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00008901
      WBGene00006174
    Transcript: T22H6.4.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        HGVSc: T22H6.4.1:c.947C>T
        HGVSp: CE16442:p.Ser316Phe
        cDNA_position: 947
        CDS_position: 947
        Protein_position: 316
        Exon_number: 6/6
        Codon_change: tCt/tTt
        Amino_acid_change: S/F
      F16H9.2b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F16H9.2b.1:c.34+16547G>A
        Intron_number: 1/3
      F16H9.2a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F16H9.2a.1:c.-24+16547G>A
        Intron_number: 1/4
  Isolation: Mutagen: EMS
  Reference: WBPaper00036200
  Remark: Allele identified through whole-genome sequencing by the Gene Knockout Consortium Paper_evidence: WBPaper00036200
    Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele