WormBase Tree Display for Variation: WBVar00277391

WBVar00277391 Evidence: Paper_evidence: WBPaper00036200
  Name: Public_name: ok5683
    Other_name: CE30698:p.Ser172Leu
      T28H11.7.1:c.-861G>A
      T28H11.1.1:c.515C>T
    HGVSg: CHROMOSOME_IV:g.5017069C>T
  Sequence_details: SMap: S_parent: Sequence: T28H11
    Flanking_sequences: CTGTCGGTGGAGCCCCAATGGGAGGAGGAT AACAATGACTGCCGTTGGAGGAGCGCCATC
    Mapping_target: T28H11
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00033306
    Laboratory: RB
    Person: WBPerson46
    Analysis: Million_Mutation_Pilot_Project
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00006053
      WBGene00020905
    Transcript: T28H11.1.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        HGVSc: T28H11.1.1:c.515C>T
        HGVSp: CE30698:p.Ser172Leu
        cDNA_position: 545
        CDS_position: 515
        Protein_position: 172
        Exon_number: 3/5
        Codon_change: tCa/tTa
        Amino_acid_change: S/L
      T28H11.7.1 VEP_consequence: 5_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: T28H11.7.1:c.-861G>A
        cDNA_position: 107
        Exon_number: 1/6
  Isolation: Mutagen: EMS
  Reference: WBPaper00036200
  Remark: Allele identified through whole-genome sequencing by the Gene Knockout Consortium Paper_evidence: WBPaper00036200
    Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele