WormBase Tree Display for Variation: WBVar00277438
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WBVar00277438 | Evidence | Paper_evidence | WBPaper00036200 | ||
---|---|---|---|---|---|
Name | Public_name | ok5551 | |||
Other_name | W04G5.6:n.969+5G>A | ||||
HGVSg | CHROMOSOME_I:g.11640953C>T | ||||
Sequence_details | SMap | S_parent | Sequence | W04G5 | |
Flanking_sequences | TTGTTACTAGTTCATCAGAGTGGGACTTTT | ATACATTTCCAGAGTGCAATGCTCAGGCTG | |||
Mapping_target | W04G5 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00033306 | ||||
Laboratory | RB | ||||
Person | WBPerson46 | ||||
Analysis | Million_Mutation_Pilot_Project | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00002205 | |||
Pseudogene | W04G5.6 | VEP_consequence | splice_region_variant,intron_variant,non_coding_transcript_variant | ||
VEP_impact | LOW | ||||
HGVSc | W04G5.6:n.969+5G>A | ||||
Intron_number | 7/8 | ||||
Isolation | Mutagen | EMS | |||
Reference | WBPaper00036200 | ||||
Remark | Allele identified through whole-genome sequencing by the Gene Knockout Consortium | Paper_evidence | WBPaper00036200 | ||
Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | |||
Method | KO_consortium_allele |