WormBase Tree Display for Variation: WBVar00277543

WBVar00277543 Evidence: Paper_evidence: WBPaper00036200
  Name: Public_name: gk1520
    Other_name: Y116A8A.9a.1:c.1213-73C>T
      Y116A8A.9c.1:c.640-73C>T
      Y116A8A.9b.1:c.1285-73C>T
    HGVSg: CHROMOSOME_IV:g.16848678G>A
  Sequence_details: SMap: S_parent: Sequence: Y116A8A
    Flanking_sequences: AAAATGGGGTTTTTTTTTTGTTTTTCGGGG AAAAATTGAATTTTAGGTTTTTTTTTTTAA
    Mapping_target: Y116A8A
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00036969
    Laboratory: VC
    Person: WBPerson427
    Analysis: Million_Mutation_Pilot_Project
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00003130
    Transcript: Y116A8A.9b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y116A8A.9b.1:c.1285-73C>T
        Intron_number: 6/6
      Y116A8A.9a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y116A8A.9a.1:c.1213-73C>T
        Intron_number: 6/7
      Y116A8A.9c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y116A8A.9c.1:c.640-73C>T
        Intron_number: 4/4
  Isolation: Mutagen: EMS
  Reference: WBPaper00036200
  Remark: Allele identified through whole-genome sequencing by the Gene Knockout Consortium Paper_evidence: WBPaper00036200
    Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele