WormBase Tree Display for Variation: WBVar00277768
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WBVar00277768 | Evidence | Paper_evidence | WBPaper00036200 | ||
---|---|---|---|---|---|
Name | Public_name | ok5101 | |||
Other_name | T28D6.6a.1:c.*81C>A | ||||
HGVSg | CHROMOSOME_III:g.11326684G>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y47D3A | |
Flanking_sequences | TTTAACGCGCGAAAAAAATTAAACCATCAATATTTAGTGTCAAGAACATT | AAAAAAAAAGGAACAGGAATTAGAAAAAAACATTGAAAAATCAGCAACCA | |||
Mapping_target | Y47D3A | ||||
Type_of_mutation | Substitution | G | T | ||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00033304 | ||||
Laboratory | RB | ||||
Person | WBPerson46 | ||||
Analysis | Million_Mutation_Pilot_Project | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00012126 | |||
Transcript | T28D6.6a.1 | VEP_consequence | 3_prime_UTR_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | T28D6.6a.1:c.*81C>A | ||||
cDNA_position | 1212 | ||||
Exon_number | 11/11 | ||||
Isolation | Mutagen | EMS | |||
Reference | WBPaper00036200 | ||||
Remark | Allele identified through whole-genome sequencing by the Gene Knockout Consortium | Paper_evidence | WBPaper00036200 | ||
Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | |||
Method | KO_consortium_allele |