WormBase Tree Display for Variation: WBVar00277812

WBVar00277812 Evidence: Paper_evidence: WBPaper00036200
  Name: Public_name: gk1811
    Other_name: Y48E1B.2a.1:c.163C>T
      Y48E1B.2b.1:c.-104+1045C>T
      Y48E1B.17.1:c.*156C>T
      CE50294:p.Arg55Trp
    HGVSg: CHROMOSOME_II:g.13539834G>A
  Sequence_details: SMap: S_parent: Sequence: Y48E1B
    Flanking_sequences: CTGTCGAATATCTAGAAGCACCGGGATCCC AAGATCCCCCGAATTCAACTGCTCCCGTTC
    Mapping_target: Y48E1B
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00036970
    Laboratory: VC
    Person: WBPerson427
    Analysis: Million_Mutation_Pilot_Project
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00303002
      WBGene00013001
    Transcript: Y48E1B.17.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: Y48E1B.17.1:c.*156C>T
        cDNA_position: 595
        Exon_number: 4/4
      Y48E1B.2b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y48E1B.2b.1:c.-104+1045C>T
        Intron_number: 1/5
      Y48E1B.2a.1 (12)
  Isolation: Mutagen: EMS
  Reference: WBPaper00036200
  Remark: Allele identified through whole-genome sequencing by the Gene Knockout Consortium Paper_evidence: WBPaper00036200
    Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele