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WormBase Tree Display for Variation: WBVar00277836

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Name Class

WBVar00277836EvidencePaper_evidenceWBPaper00036200
NamePublic_nameok5238
Other_nameY49F6B.1c.1:c.192-168C>T
Y49F6B.1f.1:c.192-168C>T
Y49F6B.1a.1:c.192-168C>T
Y49F6B.1d.1:c.192-168C>T
Y49F6B.1e.1:c.192-168C>T
Y49F6B.1b.1:c.192-168C>T
HGVSgCHROMOSOME_II:g.3505906C>T
Sequence_detailsSMapS_parentSequenceY49F6B
Flanking_sequencesATTGAGAAAATCGGAATTTTTGCCATTTTTCGATAGAAGTTCAGAAAAAATGCAGAAAAT
Mapping_targetY49F6B
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00033305
LaboratoryRB
PersonWBPerson46
AnalysisMillion_Mutation_Pilot_Project
KO_consortium_allele
StatusLive
AffectsGeneWBGene00021714
TranscriptY49F6B.1f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY49F6B.1f.1:c.192-168C>T
Intron_number2/7
Y49F6B.1e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY49F6B.1e.1:c.192-168C>T
Intron_number2/7
Y49F6B.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY49F6B.1a.1:c.192-168C>T
Intron_number3/9
Y49F6B.1c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY49F6B.1c.1:c.192-168C>T
Intron_number2/7
Y49F6B.1d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY49F6B.1d.1:c.192-168C>T
Intron_number2/7
Y49F6B.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY49F6B.1b.1:c.192-168C>T
Intron_number2/8
IsolationMutagenENU
ReferenceWBPaper00036200
RemarkAllele identified through whole-genome sequencing by the Gene Knockout ConsortiumPaper_evidenceWBPaper00036200
Sequenced by the C. elegans Gene Knockout ConsortiumPaper_evidenceWBPaper00041807
MethodKO_consortium_allele