WormBase Tree Display for Variation: WBVar00277920

WBVar00277920 Evidence: Paper_evidence: WBPaper00036200
  Name: Public_name: ok5284
    Other_name: Y55D5A.11:n.1170T>C
      Y55D5A.5c.1:c.-99+4408T>C
    HGVSg: CHROMOSOME_III:g.3036374A>G
  Sequence_details: SMap: S_parent: Sequence: Y55D5A
    Flanking_sequences: ATGATGATGATGACGAAGGAGAAAAAGACA TGATCTTCAATGTCTTAAAATGAACACAGC
    Mapping_target: Y55D5A
    Type_of_mutation: Substitution: A G
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00033305
    Laboratory: RB
    Person: WBPerson46
    Analysis: Million_Mutation_Pilot_Project
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00000898
      WBGene00219761
    Transcript: Y55D5A.5c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y55D5A.5c.1:c.-99+4408T>C
        Intron_number: 1/20
      Y55D5A.11 VEP_consequence: non_coding_transcript_exon_variant
        VEP_impact: MODIFIER
        HGVSc: Y55D5A.11:n.1170T>C
        cDNA_position: 1170
        Exon_number: 1/1
  Isolation: Mutagen: ENU
  Reference: WBPaper00036200
  Remark: Allele identified through whole-genome sequencing by the Gene Knockout Consortium Paper_evidence: WBPaper00036200
    Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele