WormBase Tree Display for Variation: WBVar00278044

WBVar00278044 Evidence: Paper_evidence: WBPaper00036200
  Name: Public_name: ok5003
    Other_name: Y71F9AL.2.1:c.585-197C>T
      Y71F9AL.18a.1:c.1720-2545G>A
      Y71F9AL.18a.2:c.1720-2545G>A
    HGVSg: CHROMOSOME_I:g.2916652C>T
  Sequence_details: SMap: S_parent: Sequence: Y71F9AL
    Flanking_sequences: TCTTTTCGTAGATCTTGTTTTTGAACAGAT TTGAAAACGTGGTGCCTCCCAAAGTATACA
    Mapping_target: Y71F9AL
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00033304
    Laboratory: RB
    Person: WBPerson46
    Analysis: Million_Mutation_Pilot_Project
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00004049
      WBGene00022108
    Transcript: Y71F9AL.18a.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y71F9AL.18a.2:c.1720-2545G>A
        Intron_number: 7/12
      Y71F9AL.18a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y71F9AL.18a.1:c.1720-2545G>A
        Intron_number: 6/11
      Y71F9AL.2.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y71F9AL.2.1:c.585-197C>T
        Intron_number: 3/8
  Isolation: Mutagen: EMS
  Reference: WBPaper00036200
  Remark: Allele identified through whole-genome sequencing by the Gene Knockout Consortium Paper_evidence: WBPaper00036200
    Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele