WormBase Tree Display for Variation: WBVar00278184

WBVar00278184 Evidence: Paper_evidence: WBPaper00036200
  Name: Public_name: gk2046
    Other_name: T19D7.7.1:c.-344G>A
      Y9C12A.1.1:c.*401G>A
    HGVSg: CHROMOSOME_X:g.680741C>T
  Sequence_details: SMap: S_parent: Sequence: Y9C12A
    Flanking_sequences: TAATTGAAAGATATGTTGGTAAGTGCAGTG AAAATGAAAAACCAAGCTGTGGGGGGAGCT
    Mapping_target: Y9C12A
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00036970
    Laboratory: VC
    Person: WBPerson427
    Analysis: Million_Mutation_Pilot_Project
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00021185
      WBGene00020575
    Transcript: Y9C12A.1.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: Y9C12A.1.1:c.*401G>A
        cDNA_position: 1189
        Exon_number: 8/8
      T19D7.7.1 VEP_consequence: 5_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: T19D7.7.1:c.-344G>A
        cDNA_position: 280
        Exon_number: 1/10
  Isolation: Mutagen: EMS
  Reference: WBPaper00036200
  Remark: Allele identified through whole-genome sequencing by the Gene Knockout Consortium Paper_evidence: WBPaper00036200
    Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele