WormBase Tree Display for Variation: WBVar00278231
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WBVar00278231 | Evidence | Paper_evidence | WBPaper00036200 | ||
---|---|---|---|---|---|
Name | Public_name | gk952 | |||
Other_name | ZK1098.3.1:c.1091C>A | ||||
CE01108:p.Ser364Ter | |||||
HGVSg | CHROMOSOME_III:g.9536742G>T | ||||
Sequence_details | SMap | S_parent | Sequence | ZK1098 | |
Flanking_sequences | GGCATATATTTTGAATTACGGTCGATATTC | AATAAGTTGCCCAGAACAATGCTTCAATTC | |||
Mapping_target | ZK1098 | ||||
Type_of_mutation | Substitution | G | T | ||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00036970 | ||||
Laboratory | VC | ||||
Person | WBPerson427 | ||||
Analysis | Million_Mutation_Pilot_Project | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00014220 | |||
Transcript | ZK1098.3.1 | VEP_consequence | stop_gained | ||
VEP_impact | HIGH | ||||
HGVSc | ZK1098.3.1:c.1091C>A | ||||
HGVSp | CE01108:p.Ser364Ter | ||||
cDNA_position | 1098 | ||||
CDS_position | 1091 | ||||
Protein_position | 364 | ||||
Exon_number | 4/8 | ||||
Codon_change | tCg/tAg | ||||
Amino_acid_change | S/* | ||||
Isolation | Mutagen | EMS | |||
Reference | WBPaper00036200 | ||||
Remark | Allele identified through whole-genome sequencing by the Gene Knockout Consortium | Paper_evidence | WBPaper00036200 | ||
Allele confirmed by Sanger sequencing | |||||
Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | |||
Method | KO_consortium_allele |