WormBase Tree Display for Variation: WBVar00278243

WBVar00278243 Evidence: Paper_evidence: WBPaper00036200
  Name: Public_name: ok5599
    Other_name: F07A11.6c.1:c.2253+139A>T
      F07A11.6a.1:c.2298+139A>T
      F07A11.6e.1:c.1380+139A>T
      F07A11.6f.1:c.1119+139A>T
      F07A11.6b.1:c.2298+139A>T
    HGVSg: CHROMOSOME_II:g.11627591T>A
  Sequence_details: SMap: S_parent: Sequence: ZK20
    Flanking_sequences: ATTGTTCAACGACTATTGAAAATGTTTTGA AAAACCAAAGACATCTGATATGAGAGCTGT
    Mapping_target: ZK20
    Type_of_mutation: Substitution: T A
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00033306
    Laboratory: RB
    Person: WBPerson46
    Analysis: Million_Mutation_Pilot_Project
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00008549
    Transcript: F07A11.6c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F07A11.6c.1:c.2253+139A>T
        Intron_number: 11/21
      F07A11.6f.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F07A11.6f.1:c.1119+139A>T
        Intron_number: 5/15
      F07A11.6b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F07A11.6b.1:c.2298+139A>T
        Intron_number: 10/20
      F07A11.6a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F07A11.6a.1:c.2298+139A>T
        Intron_number: 11/21
      F07A11.6e.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F07A11.6e.1:c.1380+139A>T
        Intron_number: 8/18
  Isolation: Mutagen: EMS
  Reference: WBPaper00036200
  Remark: Allele identified through whole-genome sequencing by the Gene Knockout Consortium Paper_evidence: WBPaper00036200
    Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele