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WormBase Tree Display for Variation: WBVar00278315

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Name Class

WBVar00278315EvidencePaper_evidenceWBPaper00036200
NamePublic_nameok5489
Other_nameZK993.2a.1:c.244-88G>A
ZK993.2b.1:c.55-88G>A
HGVSgCHROMOSOME_I:g.1108696G>A
Sequence_detailsSMapS_parentSequenceZK993
Flanking_sequencesCCACTAATAAAAGTTCTAGGCCACGGATAAATTTCTAGGCCACCAGTGACGCAATGACGT
Mapping_targetZK993
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00033306
LaboratoryRB
PersonWBPerson46
AnalysisMillion_Mutation_Pilot_Project
KO_consortium_allele
StatusLive
AffectsGeneWBGene00022838
TranscriptZK993.2a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScZK993.2a.1:c.244-88G>A
Intron_number3/6
ZK993.2b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScZK993.2b.1:c.55-88G>A
Intron_number1/3
IsolationMutagenEMS
ReferenceWBPaper00036200
RemarkAllele identified through whole-genome sequencing by the Gene Knockout ConsortiumPaper_evidenceWBPaper00036200
Sequenced by the C. elegans Gene Knockout ConsortiumPaper_evidenceWBPaper00041807
MethodKO_consortium_allele