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WormBase Tree Display for Variation: WBVar00278336

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Name Class

WBVar00278336NamePublic_namegk1231
Other_nameM02H5.3.1:c.345+1_882-43del
M02H5.3.2:c.345+1_882-43del
HGVSgCHROMOSOME_V:g.466197_466960del
Sequence_detailsSMapS_parentSequenceM02H5
Flanking_sequencesgctttgaaagttattcggaacataccacagctcccaaaattaacctaaaactaaaaaatt
Mapping_targetM02H5
Type_of_mutationDeletion
PCR_productGK1231_external
GK1231_internal
SeqStatusSequenced
Deletion_verificationPassed by CGH 2010-02-14Person_evidenceWBPerson154
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00036841
LaboratoryVC
PersonWBPerson427
KO_consortium_allele
StatusLive
AffectsGeneWBGene00019741
TranscriptM02H5.3.2VEP_consequencesplice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
VEP_impactHIGH
HGVScM02H5.3.2:c.345+1_882-43del
Intron_number4-7/8
Exon_number5-7/9
M02H5.3.1VEP_consequencesplice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
VEP_impactHIGH
HGVScM02H5.3.1:c.345+1_882-43del
Intron_number5-8/9
Exon_number6-8/10
IsolationMutagenUV/TMP
RemarkSequenced by the C. elegans Gene Knockout ConsortiumPaper_evidenceWBPaper00041807
MethodKO_consortium_allele