WormBase Tree Display for Variation: WBVar00278336
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WBVar00278336 | Name | Public_name | gk1231 | ||
---|---|---|---|---|---|
Other_name | M02H5.3.1:c.345+1_882-43del | ||||
M02H5.3.2:c.345+1_882-43del | |||||
HGVSg | CHROMOSOME_V:g.466197_466960del | ||||
Sequence_details | SMap | S_parent | Sequence | M02H5 | |
Flanking_sequences | gctttgaaagttattcggaacataccacag | ctcccaaaattaacctaaaactaaaaaatt | |||
Mapping_target | M02H5 | ||||
Type_of_mutation | Deletion | ||||
PCR_product | GK1231_external | ||||
GK1231_internal | |||||
SeqStatus | Sequenced | ||||
Deletion_verification | Passed by CGH 2010-02-14 | Person_evidence | WBPerson154 | ||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00036841 | ||||
Laboratory | VC | ||||
Person | WBPerson427 | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00019741 | |||
Transcript | M02H5.3.2 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant | ||
VEP_impact | HIGH | ||||
HGVSc | M02H5.3.2:c.345+1_882-43del | ||||
Intron_number | 4-7/8 | ||||
Exon_number | 5-7/9 | ||||
M02H5.3.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant | |||
VEP_impact | HIGH | ||||
HGVSc | M02H5.3.1:c.345+1_882-43del | ||||
Intron_number | 5-8/9 | ||||
Exon_number | 6-8/10 | ||||
Isolation | Mutagen | UV/TMP | |||
Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
Method | KO_consortium_allele |