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WormBase Tree Display for Variation: WBVar00278345

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Name Class

WBVar00278345NamePublic_namegk1064
HGVSgCHROMOSOME_X:g.13262195_13263004delinsCTTATTTC
Sequence_detailsSMapS_parentSequenceK09A11
Flanking_sequencestttgttctccactctttattcgtattgaatgtacgaagaccaactaagaatggaattgaa
Mapping_targetK09A11
Type_of_mutationInsertionCTTATTTC
Deletion
PCR_productGK1064_external
GK1064_internal
SeqStatusSequenced
Deletion_verificationPassed by CGH 2009-09-04, with low log2 scoresPerson_evidenceWBPerson154
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00037028
LaboratoryVC
PersonWBPerson427
KO_consortium_allele
StatusLive
AffectsGeneWBGene00010704
WBGene00172520
TranscriptK09A11.1.1VEP_consequencesplice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
VEP_impactHIGH
cDNA_position?-460
CDS_position?-455
Protein_position?-152
Intron_number2/6
Exon_number1-3/7
K09A11.7
IsolationMutagenUV/TMP
RemarkSequenced by the C. elegans Gene Knockout ConsortiumPaper_evidenceWBPaper00041807
MethodKO_consortium_allele