WormBase Tree Display for Variation: WBVar00296303

WBVar00296303 Name: Public_name: tm4734
    Other_name: Y110A7A.1b.1:c.888+14_1547delinsCGATATCATCGTTTAT
      Y110A7A.1a.1:c.888+14_1547delinsCGATATCATCGTTTAT
    HGVSg: CHROMOSOME_I:g.5166157_5166907delinsCGATATCATCGTTTAT
  Sequence_details: SMap: S_parent: Sequence: Y110A7A
    Flanking_sequences: aaacaagagcagaagtggtgggattaaaat catcgtttacatggcttgtttggataaagc
    Mapping_target: Y110A7A
    Source_location: 7 CHROMOSOME_I 5166156 5166908 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Insertion: CGATATCATCGTTTAT
      Deletion
    PCR_product: tm4734_external
      tm4734_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 4734
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00001833
    Transcript: Y110A7A.1b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: Y110A7A.1b.1:c.888+14_1547delinsCGATATCATCGTTTAT
        cDNA_position: ?-1556
        CDS_position: ?-1547
        Protein_position: ?-516
        Intron_number: 4-5/13
        Exon_number: 5-6/14
      Y110A7A.1a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: Y110A7A.1a.1:c.888+14_1547delinsCGATATCATCGTTTAT
        cDNA_position: ?-1552
        CDS_position: ?-1547
        Protein_position: ?-516
        Intron_number: 4-5/13
        Exon_number: 5-6/14
  Isolation: Mutagen: TMP/UV
  Genetics: Map: I
  Description: Phenotype: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
      WBPhenotype:0000688 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
  Remark: 65521/65522-CGATATCATCGTTTAT-66272/66273 (751 bp deletion + 16 bp insertion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele