WormBase Tree Display for Variation: WBVar00296709

WBVar00296709 Name: Public_name: tm4960
    Other_name: T16H12.11.2:c.197-15_792del
      T16H12.11.1:c.197-15_792del
    HGVSg: CHROMOSOME_III:g.10087541_10088301del
  Sequence_details: SMap: S_parent: Sequence: T16H12
    Flanking_sequences: attgtcaccatcagacaaggattcttcatc ataaattgaaaatttcagaaaaaattcaaa
    Mapping_target: T16H12
    Source_location: 7 CHROMOSOME_III 10087540 10088302 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm4960_external
      tm4960_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 4960
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00011819
    Transcript: T16H12.11.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T16H12.11.1:c.197-15_792del
        cDNA_position: ?-983
        CDS_position: ?-792
        Protein_position: ?-264
        Intron_number: 3-6/7
        Exon_number: 4-7/8
      T16H12.11.2 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T16H12.11.2:c.197-15_792del
        cDNA_position: ?-880
        CDS_position: ?-792
        Protein_position: ?-264
        Intron_number: 3-6/7
        Exon_number: 4-7/8
  Isolation: Mutagen: TMP/UV
  Genetics: Map: III
  Description: Phenotype: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
      WBPhenotype:0000688 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
  Remark: 10998/10999-11759/11760 (761 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele