WormBase Tree Display for Variation: WBVar00296734

WBVar00296734 Name: Public_name: tm4948
    HGVSg: CHROMOSOME_II:g.8704730_8705166del
  Sequence_details: SMap: S_parent: Sequence: C34C6
    Flanking_sequences: ttattttctttttcaatcaaaattcacact aatgcattcatatattggtattttcaattg
    Mapping_target: C34C6
    Source_location: 7 CHROMOSOME_II 8704729 8705167 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm4948_external
      tm4948_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 4948
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00004194
    Transcript: C34C6.6b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 1-2/6
        Exon_number: 1-2/7
      C34C6.6a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 2-3/8
        Exon_number: 1-3/9
  Isolation: Mutagen: TMP/UV
  Genetics: Map: II
  Description: Phenotype: WBPhenotype:0000059 Paper_evidence: WBPaper00044266
        Curator_confirmed: WBPerson237
      WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
      WBPhenotype:0000688 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
  Reference: WBPaper00044266
  Remark: 32467/32468-32904/32905 (437 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele