WormBase Tree Display for Variation: WBVar00304897
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WBVar00304897 | Evidence | Paper_evidence | WBPaper00036201 | ||
---|---|---|---|---|---|
Name | Public_name | otn8076 | |||
Other_name | OH7677_8397 | ||||
Y54E10BL.6.1:c.42A>C | |||||
CE25437:p.Leu14= | |||||
HGVSg | CHROMOSOME_I:g.3013404T>G | ||||
Sequence_details | SMap | S_parent | Sequence | Y54E10BL | |
Flanking_sequences | ATTACCGCCGTCGCCTCGCCACTTTCACTTTGTTCATTTACTGTCGGTGG | AGACTGAGTCCCAACGGATTACGCCGTTTTCCGCTCGACATTATCTGGAA | |||
Mapping_target | Y54E10BL | ||||
Type_of_mutation | Substitution | T | G | ||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00029537 | ||||
Laboratory | OTN | ||||
Analysis | WGS_Hobert | ||||
Status | Live | ||||
Affects | Gene | WBGene00003186 | |||
Transcript | Y54E10BL.6.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | Y54E10BL.6.1:c.42A>C | ||||
HGVSp | CE25437:p.Leu14= | ||||
cDNA_position | 45 | ||||
CDS_position | 42 | ||||
Protein_position | 14 | ||||
Exon_number | 2/9 | ||||
Codon_change | ctA/ctC | ||||
Amino_acid_change | L | ||||
Genetics | Map | I | |||
Reference | WBPaper00036201 | ||||
Method | WGS_Hobert |