WormBase Tree Display for Variation: WBVar00317284

WBVar00317284 Name: Public_name: tm5021
    Other_name: F52D10.4.1:c.604_810+276delinsT
    HGVSg: CHROMOSOME_X:g.11618335_11618817delinsT
  Sequence_details: SMap: S_parent: Sequence: F52D10
    Flanking_sequences: gtaaatttccagatgctcgaaacgccttta tttgtgataattaagagcttgaccatttat
    Mapping_target: F52D10
    Source_location: 7 CHROMOSOME_X 11618334 11618819 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Insertion: TT
      Deletion
    PCR_product: tm5021_external
      tm5021_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 5021
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00009931
    Transcript: F52D10.4.1 VEP_consequence: splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F52D10.4.1:c.604_810+276delinsT
        cDNA_position: 682-?
        CDS_position: 604-?
        Protein_position: 202-?
        Intron_number: 6/9
        Exon_number: 6/10
  Isolation: Mutagen: TMP/UV
  Genetics: Map: X
  Description: Phenotype: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
      WBPhenotype:0000688 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
  Remark: 35362/35363-TT-35846/35847 (484 bp deletion + 2 bp insertion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele