WormBase Tree Display for Variation: WBVar00323190
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| WBVar00323190 | Evidence | Paper_evidence | WBPaper00036731 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | bn119 | |||||
| Other_name | CE20412:p.Gln22Ter | ||||||
| Y106G6H.2.3:c.64C>T | |||||||
| Y106G6H.2.2:c.64C>T | |||||||
| Y106G6H.2.1:c.64C>T | |||||||
| HGVSg | CHROMOSOME_I:g.10435168G>A | ||||||
| Sequence_details | SMap | S_parent | Sequence | Y106G6H | |||
| Flanking_sequences | gttgctggcgctgctgctcctcaaccaggc | aaaatcagaccggctcgtcgtacaccatgg | |||||
| Mapping_target | Y106G6H | ||||||
| Type_of_mutation | Substitution | c | t | Paper_evidence | WBPaper00036731 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Laboratory | SS | ||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00003902 | |||||
| Transcript | Y106G6H.2.2 | VEP_consequence | stop_gained | ||||
| VEP_impact | HIGH | ||||||
| HGVSc | Y106G6H.2.2:c.64C>T | ||||||
| HGVSp | CE20412:p.Gln22Ter | ||||||
| cDNA_position | 274 | ||||||
| CDS_position | 64 | ||||||
| Protein_position | 22 | ||||||
| Exon_number | 3/9 | ||||||
| Codon_change | Caa/Taa | ||||||
| Amino_acid_change | Q/* | ||||||
| Y106G6H.2.3 | VEP_consequence | stop_gained | |||||
| VEP_impact | HIGH | ||||||
| HGVSc | Y106G6H.2.3:c.64C>T | ||||||
| HGVSp | CE20412:p.Gln22Ter | ||||||
| cDNA_position | 164 | ||||||
| CDS_position | 64 | ||||||
| Protein_position | 22 | ||||||
| Exon_number | 4/10 | ||||||
| Codon_change | Caa/Taa | ||||||
| Amino_acid_change | Q/* | ||||||
| Y106G6H.2.1 | VEP_consequence | stop_gained | |||||
| VEP_impact | HIGH | ||||||
| HGVSc | Y106G6H.2.1:c.64C>T | ||||||
| HGVSp | CE20412:p.Gln22Ter | ||||||
| cDNA_position | 71 | ||||||
| CDS_position | 64 | ||||||
| Protein_position | 22 | ||||||
| Exon_number | 2/8 | ||||||
| Codon_change | Caa/Taa | ||||||
| Amino_acid_change | Q/* | ||||||
| Genetics | Interpolated_map_position | I | 5.02693 | ||||
| Description | Phenotype | WBPhenotype:0000688 | Paper_evidence | WBPaper00036731 | |||
| Curator_confirmed | WBPerson3580 | ||||||
| WBPhenotype:0000823 | Paper_evidence | WBPaper00036731 | |||||
| Curator_confirmed | WBPerson3580 | ||||||
| Reference | WBPaper00036731 | ||||||
| WBPaper00044625 | |||||||
| Method | Substitution_allele |
