WormBase Tree Display for Variation: WBVar00531858
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WBVar00531858 | Name | Public_name | gk1079 | ||
---|---|---|---|---|---|
Other_name | F12E12.5.1:c.316-11_813+23delinsTGT | ||||
HGVSg | CHROMOSOME_II:g.3730360_3731001delinsACA | ||||
Sequence_details | SMap | S_parent | Sequence | F12E12 | |
Flanking_sequences | tcctgaagagcttttgagttgatgaaagtg | aaattgctggaattgaacaggaaaaatgga | |||
Mapping_target | F12E12 | ||||
Type_of_mutation | Insertion | ACA | |||
Deletion | |||||
PCR_product | gk1079_external | ||||
gk1079_internal | |||||
SeqStatus | Sequenced | ||||
Deletion_verification | Passed by PCR 2009-06-01 | Person_evidence | WBPerson154 | ||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00037314 | ||||
Laboratory | VC | ||||
Person | WBPerson427 | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00017406 | |||
Transcript | F12E12.5.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant | ||
VEP_impact | HIGH | ||||
HGVSc | F12E12.5.1:c.316-11_813+23delinsTGT | ||||
Intron_number | 4-7/7 | ||||
Exon_number | 5-7/8 | ||||
Isolation | Mutagen | UV/TMP | |||
Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
Method | KO_consortium_allele |