WormBase Tree Display for Variation: WBVar00531916
expand all nodes | collapse all nodes | view schema
WBVar00531916 | Name | Public_name | ok3300 | ||
---|---|---|---|---|---|
Other_name | W04G3.3.1:c.252+34_717delinsAG | ||||
HGVSg | CHROMOSOME_X:g.11065521_11066098delinsAG | ||||
Sequence_details | SMap | S_parent | Sequence | W04G3 | |
Flanking_sequences | agtatctatgtaaatctgctgaatgaaata | gaaggaaatccaaatggatccccaagatat | |||
Mapping_target | W04G3 | ||||
Type_of_mutation | Insertion | AG | |||
Deletion | |||||
PCR_product | ok3300_external | ||||
ok3300_internal | |||||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00037481 | ||||
Laboratory | RB | ||||
Person | WBPerson46 | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00012257 | |||
Transcript | W04G3.3.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant | ||
VEP_impact | HIGH | ||||
HGVSc | W04G3.3.1:c.252+34_717delinsAG | ||||
cDNA_position | ?-779 | ||||
CDS_position | ?-717 | ||||
Protein_position | ?-239 | ||||
Intron_number | 3-4/7 | ||||
Exon_number | 4-5/8 | ||||
Isolation | Mutagen | EMS | |||
Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
Method | KO_consortium_allele |