WormBase Tree Display for Variation: WBVar00543316
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WBVar00543316 | Name | Public_name | WBVar00543316 | ||
---|---|---|---|---|---|
Other_name | haw123451 | ||||
cewivar00175233 | |||||
CE09349:p.Lys846= | |||||
F11C3.3.1:c.2538G>A | |||||
HGVSg | CHROMOSOME_I:g.14859690C>T | ||||
Sequence_details | SMap | S_parent | Sequence | F11C3 | |
Flanking_sequences | TCGTTGATCTTCTCGAGCTCCTCGGCTTCCTTTCCGGCCTTGAGCATTGG | TTGACCTTTCCGTAAAGCTTGAACCATTCCCAGGTACGGAGAGTGCACCA | |||
Mapping_target | F11C3 | ||||
Type_of_mutation | Substitution | c | t | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00022850 | From_analysis | WGS_De_Bono | |||
Million_mutation_project_reanalysis | |||||
WBStrain00023018 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | AX | ||||
Person | WBPerson4037 | ||||
Analysis | WGS_Yanai | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01357174 | |||
WBVar01290621 | |||||
Status | Live | ||||
Affects | Gene | WBGene00006789 | |||
Transcript | F11C3.3.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | F11C3.3.1:c.2538G>A | ||||
HGVSp | CE09349:p.Lys846= | ||||
cDNA_position | 2570 | ||||
CDS_position | 2538 | ||||
Protein_position | 846 | ||||
Exon_number | 7/11 | ||||
Codon_change | aaG/aaA | ||||
Amino_acid_change | K | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Method | WGS_Yanai |