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WormBase Tree Display for Variation: WBVar00543316

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Name Class

WBVar00543316NamePublic_nameWBVar00543316
Other_namehaw123451
cewivar00175233
CE09349:p.Lys846=
F11C3.3.1:c.2538G>A
HGVSgCHROMOSOME_I:g.14859690C>T
Sequence_detailsSMapS_parentSequenceF11C3
Flanking_sequencesTCGTTGATCTTCTCGAGCTCCTCGGCTTCCTTTCCGGCCTTGAGCATTGGTTGACCTTTCCGTAAAGCTTGAACCATTCCCAGGTACGGAGAGTGCACCA
Mapping_targetF11C3
Type_of_mutationSubstitutionct
SeqStatusSequenced
Variation_typeSNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
WBStrain00022850From_analysisWGS_De_Bono
Million_mutation_project_reanalysis
WBStrain00023018From_analysisMillion_mutation_project_reanalysis
LaboratoryAX
PersonWBPerson4037
AnalysisWGS_Yanai
WGS_De_Bono
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01357174
WBVar01290621
StatusLive
AffectsGeneWBGene00006789
TranscriptF11C3.3.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScF11C3.3.1:c.2538G>A
HGVSpCE09349:p.Lys846=
cDNA_position2570
CDS_position2538
Protein_position846
Exon_number7/11
Codon_changeaaG/aaA
Amino_acid_changeK
ReferenceWBPaper00038208
WBPaper00037807
MethodWGS_Yanai