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WormBase Tree Display for Variation: WBVar00567228

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Name Class

WBVar00567228NamePublic_nameWBVar00567228
Other_namehaw147363
cewivar00028788
Y49E10.23b.1:c.708+399T>C
Y49E10.23a.1:c.708+399T>C
HGVSgCHROMOSOME_III:g.12474822T>C
Sequence_detailsSMapS_parentSequenceY49E10
Flanking_sequencesGGTAGGCAGGCGAGAACGCATGATGATTGACCGACAATTCTACAAAATCAGTGGTGCAAGGCTGTCCCATTGCTGTTTGATCTACAAAAAATGCGGCAAT
Mapping_targetY49E10
Type_of_mutationSubstitutiontc
SeqStatusSequenced
Variation_typeSNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (31)
LaboratoryAX
PersonWBPerson4037
AnalysisWGS_Yanai
WGS_De_Bono
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01337791
WBVar01272946
StatusLive
AffectsGeneWBGene00013042
TranscriptY49E10.23b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY49E10.23b.1:c.708+399T>C
Intron_number6/15
Y49E10.23a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY49E10.23a.1:c.708+399T>C
Intron_number6/14
ReferenceWBPaper00038208
WBPaper00037807
MethodWGS_Yanai