WormBase Tree Display for Variation: WBVar00567823
expand all nodes | collapse all nodes | view schema
WBVar00567823 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00567823 | |||
Other_name | haw147958 | ||||
cewivar00199812 | |||||
F54F12.3:n.60A>T | |||||
F54F12.5:n.167T>A | |||||
HGVSg | CHROMOSOME_III:g.13056438A>T | ||||
Sequence_details | SMap | S_parent | Sequence | F54F12 | |
Flanking_sequences | GAGCCTAAGCTTAAGCATAAGCCTAAGCCTGAGATTAAGGCTAAGCCTAA | CCTGTGCCTAAGCCTAAGGCTAAGCCTGAGACTAAAGATGAGCCTAAGCC | |||
Mapping_target | F54F12 | ||||
Type_of_mutation | Substitution | a | t | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Yanai | |||||
WBStrain00022899 | From_analysis | Million_mutation_project_reanalysis | |||
Person | WBPerson4037 | ||||
Analysis | WGS_Yanai | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00195333 | |||
WBGene00202410 | |||||
Transcript | F54F12.5 | VEP_consequence | non_coding_transcript_exon_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F54F12.5:n.167T>A | ||||
cDNA_position | 167 | ||||
Exon_number | 1/1 | ||||
F54F12.3 | VEP_consequence | non_coding_transcript_exon_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F54F12.3:n.60A>T | ||||
cDNA_position | 60 | ||||
Exon_number | 1/1 | ||||
Reference | WBPaper00038208 | ||||
Method | WGS_Yanai |