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WormBase Tree Display for Variation: WBVar00570639

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Name Class

WBVar00570639EvidencePaper_evidenceWBPaper00038208
NamePublic_nameWBVar00570639
Other_namehaw150774
cewivar00203575
Y54G2A.17b.1:c.1611+409C>G
Y54G2A.17a.3:c.1551+409C>G
Y54G2A.17a.1:c.1551+409C>G
Y54G2A.17a.2:c.1551+409C>G
HGVSgCHROMOSOME_IV:g.2872820G>C
Sequence_detailsSMapS_parentSequenceY54G2A
Flanking_sequencesAAAAGTTCAATTCGGGCAATTTGTCGATTTTCCGAAACTGTTAAATTCCGCAATTTGCCAATTTGCCGAAAATTTTTAATTCCGGCAAATTGCCGATTTG
Mapping_targetY54G2A
Type_of_mutationSubstitutiongc
SeqStatusSequenced
Variation_typeSNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (13)
PersonWBPerson4037
AnalysisWGS_Yanai
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00021882
TranscriptY54G2A.17a.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.3:c.1551+409C>G
Intron_number6/7
Y54G2A.17b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17b.1:c.1611+409C>G
Intron_number7/7
Y54G2A.17a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.2:c.1551+409C>G
Intron_number7/8
Y54G2A.17a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.1:c.1551+409C>G
Intron_number7/8
ReferenceWBPaper00038208
MethodWGS_Yanai