WormBase Tree Display for Variation: WBVar00570639
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WBVar00570639 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00570639 | |||
Other_name | haw150774 | ||||
cewivar00203575 | |||||
Y54G2A.17b.1:c.1611+409C>G | |||||
Y54G2A.17a.3:c.1551+409C>G | |||||
Y54G2A.17a.1:c.1551+409C>G | |||||
Y54G2A.17a.2:c.1551+409C>G | |||||
HGVSg | CHROMOSOME_IV:g.2872820G>C | ||||
Sequence_details | SMap | S_parent | Sequence | Y54G2A | |
Flanking_sequences | AAAAGTTCAATTCGGGCAATTTGTCGATTTTCCGAAACTGTTAAATTCCG | CAATTTGCCAATTTGCCGAAAATTTTTAATTCCGGCAAATTGCCGATTTG | |||
Mapping_target | Y54G2A | ||||
Type_of_mutation | Substitution | g | c | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (13) | |||||
Person | WBPerson4037 | ||||
Analysis | WGS_Yanai | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00021882 | |||
Transcript | Y54G2A.17a.3 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y54G2A.17a.3:c.1551+409C>G | ||||
Intron_number | 6/7 | ||||
Y54G2A.17b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y54G2A.17b.1:c.1611+409C>G | ||||
Intron_number | 7/7 | ||||
Y54G2A.17a.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y54G2A.17a.2:c.1551+409C>G | ||||
Intron_number | 7/8 | ||||
Y54G2A.17a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y54G2A.17a.1:c.1551+409C>G | ||||
Intron_number | 7/8 | ||||
Reference | WBPaper00038208 | ||||
Method | WGS_Yanai |