Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Variation: WBVar00570646

expand all nodes | collapse all nodes | view schema

Name Class

WBVar00570646EvidencePaper_evidenceWBPaper00038208
NamePublic_nameWBVar00570646
Other_namehaw150781
cewivar00203588
Y54G2A.17a.1:c.1179+1022T>C
Y54G2A.17a.2:c.1179+1022T>C
Y54G2A.17b.1:c.1239+1022T>C
Y54G2A.17a.3:c.1179+1022T>C
HGVSgCHROMOSOME_IV:g.2878240A>G
Sequence_detailsSMapS_parentSequenceY54G2A
Flanking_sequencesTTTTGATGTTTAAGCGCAGATACACTACACGTAACTTATTCAGAAACACTCAACTTCTTCCTCACGAGGGACGAGGAAAAGTGGTTTCTAGGCCATGGCC
Mapping_targetY54G2A
Type_of_mutationSubstitutionag
SeqStatusSequenced
Variation_typeSNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (15)
PersonWBPerson4037
AnalysisWGS_Yanai
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00021882
TranscriptY54G2A.17a.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.3:c.1179+1022T>C
Intron_number4/7
Y54G2A.17b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17b.1:c.1239+1022T>C
Intron_number5/7
Y54G2A.17a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.2:c.1179+1022T>C
Intron_number5/8
Y54G2A.17a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.1:c.1179+1022T>C
Intron_number5/8
ReferenceWBPaper00038208
MethodWGS_Yanai