WormBase Tree Display for Variation: WBVar00600811

WBVar00600811 Name: Public_name: tm5405
    Other_name: C46A5.1.1:c.255+7_565+10del
    HGVSg: CHROMOSOME_IV:g.7764241_7764944del
  Sequence_details: SMap: S_parent: Sequence: C46A5
    Flanking_sequences: ccattggcaccggttccaaatgaggtaatt cctttttaacccattactcgttcttttttc
    Mapping_target: C46A5
    Source_location: 7 CHROMOSOME_IV 7764240 7764945 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm5405_external
      tm5405_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 5405
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00016698
    Transcript: C46A5.1.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C46A5.1.1:c.255+7_565+10del
        Intron_number: 2-4/10
        Exon_number: 3-4/11
  Isolation: Mutagen: TMP/UV
  Genetics: Map: IV
  Description: Phenotype: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
      WBPhenotype:0000688 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
  Remark: 16174/16175-16878/16879 (704 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele