WormBase Tree Display for Variation: WBVar00600878

WBVar00600878 Name: Public_name: tm5507
    HGVSg: CHROMOSOME_III:g.4474810_4475172delinsTTT
  Sequence_details: SMap: S_parent: Sequence: F56F3
    Flanking_sequences: ctctccgttgtggagacaaacccgtatttt ttagttattcaacaattagcattaaaatcc
    Mapping_target: F56F3
    Source_location: 7 CHROMOSOME_III 4474809 4475173 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Insertion: TTT
      Deletion
    PCR_product: tm5507_external
      tm5507_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 5507
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00004132
    Transcript: F56F3.1.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: ?-293
        CDS_position: ?-286
        Protein_position: ?-96
        Intron_number: 2/11
        Exon_number: 1-3/12
  Isolation: Mutagen: TMP/UV
  Genetics: Map: III
  Description: Phenotype: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
      WBPhenotype:0000688 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
  Remark: 22371/22372-TTT-22734/22735 (363 bp deletion + 3 bp insertion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele