WormBase Tree Display for Variation: WBVar00600883

WBVar00600883 Name: Public_name: tm5510
    Other_name: T04A8.9.1:c.80_208-50delinsTAAAAGTTGCTTCCTGTGATTAAGATTAATCTTAACTTTTTAGGC
    HGVSg: CHROMOSOME_III:g.4698205_4698655delinsTAAAAGTTGCTTCCTGTGATTAAGATTAATCTTAACTTTTTAGGC
  Sequence_details: SMap: S_parent: Sequence: T04A8
    Flanking_sequences: cagttccatgtagtagtcaacaggatcatt ggtaacataaaagttgcttcctgtgagttt
    Mapping_target: T04A8
    Source_location: 7 CHROMOSOME_III 4698201 4698657 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Insertion: ACATAAAAGTTGCTTCCTGTGATTAAGATTAATCTTAACTTTTTAGGCT
      Deletion
    PCR_product: tm5510_external
      tm5510_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 5510
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00001036
    Transcript: T04A8.9.1 VEP_consequence: splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T04A8.9.1:c.80_208-50delinsTAAAAGTTGCTTCCTGTGATTAAGATTAATCTTAACTTTTTAGGC
        cDNA_position: 84-?
        CDS_position: 77-?
        Protein_position: 26-?
        Intron_number: 2/4
        Exon_number: 2/5
  Isolation: Mutagen: TMP/UV
  Genetics: Map: III
  Description: Phenotype: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
      WBPhenotype:0000688 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
  Remark: 20720/20721-ACATAAAAGTTGCTTCCTGTGATTAAGATTAATCTTAACTTTTTAGGCT-21175/21176 (455 bp deletion + 49 bp insertion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele