WormBase Tree Display for Variation: WBVar00600884

WBVar00600884 Name: Public_name: tm5512
    HGVSg: CHROMOSOME_X:g.5862632_5863263del
  Sequence_details: SMap: S_parent: Sequence: F49E10
    Flanking_sequences: cctcatgttttgaatacttctagctatttt ggtaataaaaattgaaatattatgtttcag
    Mapping_target: F49E10
    Source_location: 7 CHROMOSOME_X 5862631 5863264 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm5512_external
      tm5512_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 5512
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00006424
    Transcript: F49E10.5a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 2-3/14
        Exon_number: 1-3/15
  Isolation: Mutagen: TMP/UV
  Genetics: Map: X
  Description: Phenotype: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
      WBPhenotype:0000688 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
  Remark: 3350/3351-3982/3983 (632 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele