WormBase Tree Display for Variation: WBVar00600908

WBVar00600908 Name: Public_name: tm5500
    Other_name: Y54G2A.4.1:c.713-157_1020+208del
    HGVSg: CHROMOSOME_IV:g.2935375_2936047del
  Sequence_details: SMap: S_parent: Sequence: Y54G2A
    Flanking_sequences: aaccaaaattccatcgctgtttgattttta aaaaatttcccaataaaaattggatttttc
    Mapping_target: Y54G2A
    Source_location: 7 CHROMOSOME_IV 2935374 2936048 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm5500_external
      tm5500_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 5500
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00021870
    Transcript: Y54G2A.4.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: Y54G2A.4.1:c.713-157_1020+208del
        Intron_number: 6-7/9
        Exon_number: 7/10
  Isolation: Mutagen: TMP/UV
  Genetics: Map: IV
  Description: Phenotype_not_observed: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as homozygous viable by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
  Remark: 185153/185154-185826/185827 (673 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele