WormBase Tree Display for Variation: WBVar00600968

WBVar00600968 Name: Public_name: tm5615
    Other_name: D2085.4.1:c.419+25_740+17del
    HGVSg: CHROMOSOME_II:g.8665396_8665812del
  Sequence_details: SMap: S_parent: Sequence: D2085
    Flanking_sequences: tttcaggtaatttctgaatatggcaattaa aaataacagttttcaaattggatcttcagg
    Mapping_target: D2085
    Source_location: 7 CHROMOSOME_II 8665395 8665813 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm5615_external
      tm5615_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 5615
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00008429
    Transcript: D2085.4.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: D2085.4.1:c.419+25_740+17del
        Intron_number: 3-5/16
        Exon_number: 4-5/17
  Isolation: Mutagen: TMP/UV
  Genetics: Map: II
  Description: Phenotype: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
      WBPhenotype:0000688 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
  Remark: 24950/24951-25367/25368 (417 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele