WormBase Tree Display for Variation: WBVar00601108
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| WBVar00601108 | Name | Public_name | gk3041 | ||
|---|---|---|---|---|---|
| HGVSg | CHROMOSOME_V:g.4409339_4410419del | ||||
| Sequence_details | SMap | S_parent | Sequence | Y47D7A | |
| Flanking_sequences | agccaggtttgctcaaggtaaaaaatgcct | ttttactcctttttctacagtcgttgttat | |||
| Mapping_target | Y47D7A | ||||
| Type_of_mutation | Deletion | ||||
| PCR_product | gk3041_external | ||||
| gk3041_internal | |||||
| SeqStatus | Sequenced | ||||
| Variation_type | Allele | ||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00036801 | ||||
| Laboratory | VC | ||||
| Person | WBPerson427 | ||||
| KO_consortium_allele | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00003708 | |||
| Transcript | F13A2.8.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant | ||
| VEP_impact | HIGH | ||||
| Intron_number | 5-6/6 | ||||
| Exon_number | 6-7/7 | ||||
| Isolation | Mutagen | UV/TMP | |||
| Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
| Method | KO_consortium_allele |
