WormBase Tree Display for Variation: WBVar00604026

WBVar00604026 Name: Public_name: tm5757
    Other_name: F11H8.4a.1:c.335_574+92del
      F11H8.4b.1:c.335_574+92del
    HGVSg: CHROMOSOME_III:g.7028395_7028862del
  Sequence_details: SMap: S_parent: Sequence: F11H8
    Flanking_sequences: agttctatgacattttgacatcttagcacc cgcttctccttttgaatttctgattaggaa
    Mapping_target: F11H8
    Source_location: 7 CHROMOSOME_III 7028394 7028863 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm5757_external
      tm5757_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 5757
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00000872
    Transcript: F11H8.4b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F11H8.4b.1:c.335_574+92del
        cDNA_position: 344-?
        CDS_position: 335-?
        Protein_position: 112-?
        Intron_number: 2-3/15
        Exon_number: 2-3/16
      F11H8.4a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F11H8.4a.1:c.335_574+92del
        cDNA_position: 342-?
        CDS_position: 335-?
        Protein_position: 112-?
        Intron_number: 2-3/15
        Exon_number: 2-3/16
  Isolation: Mutagen: TMP/UV
  Genetics: Map: III
  Description: Phenotype: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal or sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
      WBPhenotype:0000688 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal or sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
  Remark: 19185/19186-19653/19654 (468 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele