WormBase Tree Display for Variation: WBVar00604034

WBVar00604034 Name: Public_name: tm5766
    Other_name: Y37E11AR.6a.1:c.373+92_404del
      Y37E11AR.6b.1:c.58+92_89del
    HGVSg: CHROMOSOME_IV:g.3761938_3762410del
  Sequence_details: SMap: S_parent: Sequence: Y37E11AR
    Flanking_sequences: tgggacgcacaaagaccgccttgctcgttg ttaaatttctcaaaattaatattttgttcc
    Mapping_target: Y37E11AR
    Source_location: 7 CHROMOSOME_IV 3761937 3762411 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm5766_external
      tm5766_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 5766
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00006869
    Transcript: Y37E11AR.6a.1 VEP_consequence: splice_acceptor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: Y37E11AR.6a.1:c.373+92_404del
        cDNA_position: ?-410
        CDS_position: ?-404
        Protein_position: ?-135
        Intron_number: 3/5
        Exon_number: 4/6
      Y37E11AR.6b.1 VEP_consequence: splice_acceptor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: Y37E11AR.6b.1:c.58+92_89del
        cDNA_position: ?-89
        CDS_position: ?-89
        Protein_position: ?-30
        Intron_number: 1/2
        Exon_number: 2/3
  Isolation: Mutagen: TMP/UV
  Genetics: Map: IV
  Description: Phenotype: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
      WBPhenotype:0000688 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
  Remark: 26265/26266-26738/26739 (473 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele