WormBase Tree Display for Variation: WBVar00604041

WBVar00604041 Name: Public_name: tm5774
    Other_name: ZK524.3a.1:c.1164_1536+14delinsTTTAGGTTTAATCAAAAT
    HGVSg: CHROMOSOME_I:g.7458598_7459035delinsATTTTGATTAAACCTAAA
  Sequence_details: SMap: S_parent: Sequence: ZK524
    Flanking_sequences: atgttaaattttgattaaacctaaaaatga aacgttcgggatgtttcatagccaccgtat
    Mapping_target: ZK524
    Source_location: 7 CHROMOSOME_I 7458597 7459036 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Insertion: ATTTTGATTAAACCTAAA
      Deletion
    PCR_product: tm5774_external
      tm5774_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 5774
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00003074
    Transcript: ZK524.3a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: ZK524.3a.1:c.1164_1536+14delinsTTTAGGTTTAATCAAAAT
        cDNA_position: 1167-?
        CDS_position: 1164-?
        Protein_position: 388-?
        Intron_number: 5-6/10
        Exon_number: 5-6/11
      ZK524.3c.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 1-2/5
        Exon_number: 1-2/6
  Isolation: Mutagen: TMP/UV
  Genetics: Map: I
  Description: Phenotype: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
      WBPhenotype:0000688 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
  Remark: 22879/22880-ATTTTGATTAAACCTAAA-23317/23318 (438 bp deletion + 18 bp insertion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele