WormBase Tree Display for Variation: WBVar00604148
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| WBVar00604148 | Name | Public_name | gk3299 | ||
|---|---|---|---|---|---|
| Other_name | F01D4.6a.1:c.79-60_571-13delinsTTTTTATTTT | ||||
| F01D4.6d.1:c.79-252_520-13delinsTTTTTATTTT | |||||
| HGVSg | CHROMOSOME_IV:g.10460250_10461353delinsAAAATAAAAA | ||||
| Sequence_details | SMap | S_parent | Sequence | F01D4 | |
| Flanking_sequences | tccataagcgtcaacctcctaaaaattaaa | ataaaatgagattggaaaatagaatgaata | |||
| Mapping_target | F01D4 | ||||
| Type_of_mutation | Insertion | AAAATAAAAA | |||
| Deletion | |||||
| PCR_product | gk3299_external | ||||
| gk3299_internal | |||||
| SeqStatus | Sequenced | ||||
| Deletion_verification | gk3299 passed by CGH | Person_evidence | WBPerson154 | ||
| Variation_type | Allele | ||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00037744 | ||||
| Laboratory | VC | ||||
| Person | WBPerson427 | ||||
| KO_consortium_allele | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00003167 | |||
| Transcript | F01D4.6d.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant | ||
| VEP_impact | HIGH | ||||
| HGVSc | F01D4.6d.1:c.79-252_520-13delinsTTTTTATTTT | ||||
| Intron_number | 2-5/8 | ||||
| Exon_number | 3-5/9 | ||||
| F01D4.6c.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant | |||
| VEP_impact | HIGH | ||||
| Intron_number | 1-3/5 | ||||
| Exon_number | 1-3/6 | ||||
| F01D4.6a.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant | |||
| VEP_impact | HIGH | ||||
| HGVSc | F01D4.6a.1:c.79-60_571-13delinsTTTTTATTTT | ||||
| Intron_number | 2-6/9 | ||||
| Exon_number | 3-6/10 | ||||
| Isolation | Mutagen | UV/TMP | |||
| Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
| Method | KO_consortium_allele |
