WormBase Tree Display for Variation: WBVar00604161
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WBVar00604161 | Name | Public_name | gk3511 | ||
---|---|---|---|---|---|
HGVSg | CHROMOSOME_III:g.8163662_8165484del | ||||
Sequence_details | SMap | S_parent | Sequence | C50C3 | |
Flanking_sequences | ttttttttaagttggacagtttttaaagtt | gcaacttgaaagcagtgagttatttacaag | |||
Mapping_target | C50C3 | ||||
Type_of_mutation | Deletion | ||||
PCR_product | gk3511_external | ||||
gk3511_internal | |||||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00037786 | ||||
Laboratory | VC | ||||
Person | WBPerson427 | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00004187 | |||
Transcript | C50C3.6.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant | ||
VEP_impact | HIGH | ||||
cDNA_position | ?-1058 | ||||
CDS_position | ?-1054 | ||||
Protein_position | ?-352 | ||||
Intron_number | 2/11 | ||||
Exon_number | 1-3/12 | ||||
Isolation | Mutagen | UV/TMP | |||
Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
Method | KO_consortium_allele |