WormBase Tree Display for Variation: WBVar01248476
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WBVar01248476 | Evidence | Paper_evidence | WBPaper00037807 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | WBVar01248476 | |||||
Other_name | cewivar00015418 | ||||||
Y38E10A.21c.1:c.119-2934T>A | |||||||
Y38E10A.21d.1:c.323-2934T>A | |||||||
HGVSg | CHROMOSOME_II:g.12666293T>A | ||||||
Sequence_details | SMap | S_parent | Sequence | Y38E10A | |||
Flanking_sequences | CTTTGCGGGGCGCCATGGCGCAGCCGGTAAGAGGTTCGCACTCTGAACGA | AATGTCAAAAGTTACTCAAGTTCGAGCCCCCAATAACGCGTAAAATTTTT | |||||
Mapping_target | Y38E10A | ||||||
Type_of_mutation | Substitution | t | A | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | ||||||
Variation_type | SNP | ||||||
Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain (36) | |||||||
Laboratory | AX | ||||||
Analysis | WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | |||||||
DB_info | Database | dbSNP_ss | ss | 539085571 | |||
History | Acquires_merge | WBVar01380042 | |||||
WBVar01315012 | |||||||
Status | Live | ||||||
Affects | Gene | WBGene00004347 | |||||
Transcript | Y38E10A.21d.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | ||||||
HGVSc | Y38E10A.21d.1:c.323-2934T>A | ||||||
Intron_number | 4/8 | ||||||
Y38E10A.21c.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | Y38E10A.21c.1:c.119-2934T>A | ||||||
Intron_number | 2/7 | ||||||
Reference | WBPaper00037807 | ||||||
Method | WGS_De_Bono |