WormBase Tree Display for Variation: WBVar01254619
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| WBVar01254619 | Evidence | Paper_evidence | WBPaper00037807 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | WBVar01254619 | |||||
| Other_name | cewivar00283536 | ||||||
| F30H5.1.1:c.*162C>T | |||||||
| HGVSg | CHROMOSOME_III:g.502225C>T | ||||||
| Sequence_details | SMap | S_parent | Sequence | F30H5 | |||
| Flanking_sequences | GCTTTTTTCTACAAAATTCAAATTCGATTTTTTGATTTAAAGCATCTTTA | TCAATTTCCACGTGGCAGAAAACCCAAAAACGATTTTTAAAAGGTTGGCT | |||||
| Mapping_target | F30H5 | ||||||
| Type_of_mutation | Substitution | c | T | Paper_evidence | WBPaper00037807 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | SNP | ||||||
| Natural_variant | |||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | ||||
| WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | |||||
| WBStrain00006642 | From_analysis | WGS_De_Bono | |||||
| WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | |||||
| WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | |||||
| WBStrain00022852 | From_analysis | Million_mutation_project_reanalysis | |||||
| WBStrain00022856 | From_analysis | Million_mutation_project_reanalysis | |||||
| WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | |||||
| WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||||
| Laboratory | AX | ||||||
| Analysis | WGS_De_Bono | ||||||
| Million_mutation_project_reanalysis | |||||||
| DB_info | Database | dbSNP_ss | ss | 539091100 | |||
| Status | Live | ||||||
| Affects | Gene | WBGene00006781 | |||||
| Transcript | F30H5.1.1 | VEP_consequence | 3_prime_UTR_variant | ||||
| VEP_impact | MODIFIER | ||||||
| HGVSc | F30H5.1.1:c.*162C>T | ||||||
| cDNA_position | 3050 | ||||||
| Exon_number | 13/13 | ||||||
| Reference | WBPaper00037807 | ||||||
| Method | WGS_De_Bono |
