WormBase Tree Display for Variation: WBVar01263407

WBVar01263407 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar01263407
    Other_name: cewivar00387241
      F54D8.4b.1:c.84-33G>A
      F54D8.4a.1:c.366-33G>A
    HGVSg: CHROMOSOME_III:g.5083883C>T
  Sequence_details: SMap: S_parent: Sequence: F54D8
    Flanking_sequences: AAATCGATTCGTTGAACCCTGTAAAGCTTGAATGGTATATCACGCGGGTT TTAAAACTTCGTTTTTGAAATCGAGGTGAAAGCGCGCTCTATAGCCAAAT
    Mapping_target: F54D8
    Type_of_mutation: Substitution: c T Paper_evidence: WBPaper00037807
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00006642 From_analysis: WGS_De_Bono
      WBStrain00006643 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006645 From_analysis: Million_mutation_project_reanalysis
    Laboratory: AX
    Analysis: WGS_De_Bono
      Million_mutation_project_reanalysis
    DB_info: Database: dbSNP_ss ss 539099010
    Status: Live
  Affects: Gene: WBGene00000279
    Transcript: F54D8.4a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F54D8.4a.1:c.366-33G>A
        Intron_number: 4/6
      F54D8.4b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F54D8.4b.1:c.84-33G>A
        Intron_number: 1/3
  Reference: WBPaper00037807
  Method: WGS_De_Bono