WormBase Tree Display for Variation: WBVar01263423

WBVar01263423 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar01263423
    Other_name: cewivar00387248
      CE47843:p.Pro555Ser
      F54D8.6.1:c.1663C>T
    HGVSg: CHROMOSOME_III:g.5105609C>T
  Sequence_details: SMap: S_parent: Sequence: F54D8
    Flanking_sequences: GAAGTAGGGATCGAGAACCGGGTGGTGGTGTTCCTGGGGTTGATCGGGCG CAGGCAGAGGATCTCGTGGAATCGATCGCCCACCTGGAGGTGATTCTCGT
    Mapping_target: F54D8
    Type_of_mutation: Substitution: c T Paper_evidence: WBPaper00037807
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00006642 From_analysis: WGS_De_Bono
      WBStrain00006643 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006645 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006646 From_analysis: WGS_Andersen
      WBStrain00006647 From_analysis: WGS_Andersen
      WBStrain00006649 From_analysis: WGS_Andersen
    Laboratory: AX
    Analysis: WGS_De_Bono
      Million_mutation_project_reanalysis
      WGS_Andersen
    DB_info: Database: dbSNP_ss ss 539099025
    History: Acquires_merge: WBVar01445594
        WBVar01445595
    Status: Live
  Affects: Gene: WBGene00018802
    Transcript: F54D8.6.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        HGVSc: F54D8.6.1:c.1663C>T
        HGVSp: CE47843:p.Pro555Ser
        cDNA_position: 1669
        CDS_position: 1663
        Protein_position: 555
        Exon_number: 10/15
        Codon_change: Cca/Tca
        Amino_acid_change: P/S
  Reference: WBPaper00037807
  Method: WGS_De_Bono