WormBase Tree Display for Variation: WBVar01267974
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| WBVar01267974 | Evidence | Paper_evidence | WBPaper00037807 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | WBVar01267974 | |||||
| Other_name (11) | |||||||
| HGVSg | CHROMOSOME_III:g.10527069C>A | ||||||
| Sequence_details | SMap | S_parent | Sequence | T21C12 | |||
| Flanking_sequences | CGGTATGCCAATTTTGTCGAGAAATCGTCGTTTCCCCCCACCTCCTAGTA | ATTTATTCCCACACAATCAAGATACAAAACCTTGCAGAATGCTGACCCCT | |||||
| Mapping_target | T21C12 | ||||||
| Type_of_mutation | Substitution | c | A | Paper_evidence | WBPaper00037807 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | SNP | ||||||
| Natural_variant | |||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Strain (17) | |||||||
| Laboratory | AX | ||||||
| Analysis | WGS_De_Bono | ||||||
| Million_mutation_project_reanalysis | |||||||
| DB_info | Database | dbSNP_ss | ss | 539103120 | |||
| History | Acquires_merge | WBVar01333010 | |||||
| Status | Live | ||||||
| Affects | Gene | WBGene00006784 | |||||
| Transcript | T21C12.1l.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | ||||||
| HGVSc | T21C12.1l.1:c.540-38C>A | ||||||
| Intron_number | 5/8 | ||||||
| T21C12.1k.1 | VEP_consequence | intron_variant | |||||
| VEP_impact | MODIFIER | ||||||
| HGVSc | T21C12.1k.1:c.563-901C>A | ||||||
| Intron_number | 5/11 | ||||||
| T21C12.1m.1 | VEP_consequence | intron_variant | |||||
| VEP_impact | MODIFIER | ||||||
| HGVSc | T21C12.1m.1:c.59-901C>A | ||||||
| Intron_number | 1/8 | ||||||
| T21C12.1c.1 | VEP_consequence | intron_variant | |||||
| VEP_impact | MODIFIER | ||||||
| HGVSc | T21C12.1c.1:c.563-901C>A | ||||||
| Intron_number | 6/18 | ||||||
| T21C12.1e.1 | VEP_consequence | intron_variant | |||||
| VEP_impact | MODIFIER | ||||||
| HGVSc | T21C12.1e.1:c.563-901C>A | ||||||
| Intron_number | 6/19 | ||||||
| T21C12.1c.2 | VEP_consequence | intron_variant | |||||
| VEP_impact | MODIFIER | ||||||
| HGVSc | T21C12.1c.2:c.563-901C>A | ||||||
| Intron_number | 6/14 | ||||||
| T21C12.1b.1 | VEP_consequence | intron_variant | |||||
| VEP_impact | MODIFIER | ||||||
| HGVSc | T21C12.1b.1:c.1044-38C>A | ||||||
| Intron_number | 10/14 | ||||||
| T21C12.1o.1 | VEP_consequence | intron_variant | |||||
| VEP_impact | MODIFIER | ||||||
| HGVSc | T21C12.1o.1:c.58+2744C>A | ||||||
| Intron_number | 1/5 | ||||||
| T21C12.1d.1 | VEP_consequence | intron_variant | |||||
| VEP_impact | MODIFIER | ||||||
| HGVSc | T21C12.1d.1:c.563-901C>A | ||||||
| Intron_number | 6/17 | ||||||
| T21C12.1f.1 | VEP_consequence | intron_variant | |||||
| VEP_impact | MODIFIER | ||||||
| HGVSc | T21C12.1f.1:c.562+2744C>A | ||||||
| Intron_number | 6/11 | ||||||
| Reference | WBPaper00037807 | ||||||
| Method | WGS_De_Bono |
