WormBase Tree Display for Variation: WBVar01268678

WBVar01268678 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar01268678
    Other_name: cewivar00024453
      CE44343:p.Asn67Ser
      M142.1c.1:c.200A>G
      CE06203:p.Asn42Ser
      M142.1a.1:c.125A>G
      CE43523:p.Asn22Ser
      M142.1b.1:c.65A>G
    HGVSg: CHROMOSOME_III:g.10907662A>G
  Sequence_details: SMap: S_parent: Sequence: M142
    Flanking_sequences: ACCGGTAACCGAACAGGCTATAACCACCGAGGCGGAGCTTCTCGCGAAAA TCAAATTACACCAAATGATGTGCTAGCTCTTCCAGGAATCACTCAAGGTA
    Mapping_target: M142
    Type_of_mutation: Substitution: a G Paper_evidence: WBPaper00037807
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00000032 From_analysis: Million_mutation_project_reanalysis
      WBStrain00004600 From_analysis: Million_mutation_project_reanalysis
      WBStrain00004602 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006622 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006625 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006642 From_analysis: WGS_De_Bono
      WBStrain00006643 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006645 From_analysis: Million_mutation_project_reanalysis
      WBStrain00008273 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022850 From_analysis: WGS_De_Bono
          Million_mutation_project_reanalysis
      WBStrain00022852 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022856 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022886 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022902 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022930 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023072 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023139 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023191 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023286 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027647 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027648 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027652 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027660 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027662 From_analysis: Million_mutation_project_reanalysis
      WBStrain00031113 From_analysis: Million_mutation_project_reanalysis
    Laboratory: AX
    Analysis: WGS_De_Bono
      Million_mutation_project_reanalysis
    DB_info: Database: dbSNP_ss ss 539103754
    History: Acquires_merge: WBVar01333714
    Status: Live
  Affects: Gene: WBGene00006843
    Transcript: M142.1a.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        SIFT: 0.49 tolerated
        PolyPhen: 0 benign
        HGVSc: M142.1a.1:c.125A>G
        HGVSp: CE06203:p.Asn42Ser
        cDNA_position: 139
        CDS_position: 125
        Protein_position: 42
        Exon_number: 3/6
        Codon_change: aAt/aGt
        Amino_acid_change: N/S
      M142.1c.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        SIFT: 0.6 tolerated
        PolyPhen: 0 benign
        HGVSc: M142.1c.1:c.200A>G
        HGVSp: CE44343:p.Asn67Ser
        cDNA_position: 207
        CDS_position: 200
        Protein_position: 67
        Exon_number: 4/7
        Codon_change: aAt/aGt
        Amino_acid_change: N/S
      M142.1b.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        SIFT: 0.53 tolerated_low_confidence
        PolyPhen: 0 benign
        HGVSc: M142.1b.1:c.65A>G
        HGVSp: CE43523:p.Asn22Ser
        cDNA_position: 65
        CDS_position: 65
        Protein_position: 22
        Exon_number: 1/4
        Codon_change: aAt/aGt
        Amino_acid_change: N/S
  Reference: WBPaper00037807
  Method: WGS_De_Bono