WormBase Tree Display for Variation: WBVar01291960
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| WBVar01291960 | Evidence | Paper_evidence | WBPaper00037807 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | WBVar01291960 | |||||
| Other_name | cewivar00506701 | ||||||
| T27A1.6.1:c.54+88A>T | |||||||
| HGVSg | CHROMOSOME_II:g.516297A>T | ||||||
| Sequence_details | SMap | S_parent | Sequence | T27A1 | |||
| Flanking_sequences | AGTTTTGAACTATTTGACTGAAATATTAAACAAGTGTTTTCTGGCAGAAA | GGTGTATTTTCAGCGTTAAAACTGCTAAAACCCGGTTTGAAGCTATCTAA | |||||
| Mapping_target | T27A1 | ||||||
| Type_of_mutation | Substitution | a | T | Paper_evidence | WBPaper00037807 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | SNP | ||||||
| Natural_variant | |||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | ||||
| WGS_De_Bono | |||||||
| WBStrain00023018 | From_analysis | Million_mutation_project_reanalysis | |||||
| Laboratory | AX | ||||||
| Analysis | WGS_De_Bono | ||||||
| Million_mutation_project_reanalysis | |||||||
| DB_info | Database | dbSNP_ss | ss | 539151044 | |||
| Status | Live | ||||||
| Affects | Gene | WBGene00003106 | |||||
| Transcript | T27A1.6.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | ||||||
| HGVSc | T27A1.6.1:c.54+88A>T | ||||||
| Intron_number | 2/10 | ||||||
| Reference | WBPaper00037807 | ||||||
| Method | WGS_De_Bono |
