WormBase Tree Display for Variation: WBVar01315023

WBVar01315023 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar01315023
    Other_name: cewivar00140397
      Y38E10A.21d.1:c.790-112G>C
      Y38E10A.21c.1:c.586-112G>C
      Y38E10A.21a.1:c.514-112G>C
      Y38E10A.21b.1:c.394-112G>C
    HGVSg: CHROMOSOME_II:g.12671374G>C
  Sequence_details: SMap: S_parent: Sequence: Y38E10A
    Flanking_sequences: AATCTACCCCAGATATTGCGGAGCAAAAATGGCCAAGTTCGGCCTAAACT TTCCATTTCAATTTATGAGGGAAGCAAGAAATCCGTGTAACTTTAGAAAT
    Mapping_target: Y38E10A
    Type_of_mutation: Substitution: g C Paper_evidence: WBPaper00037807
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004600 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006640 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022850 From_analysis: Million_mutation_project_reanalysis
          WGS_De_Bono
      WBStrain00023665 From_analysis: Million_mutation_project_reanalysis
      WBStrain00024204 From_analysis: Million_mutation_project_reanalysis
    Laboratory: AX
    Analysis: WGS_De_Bono
      Million_mutation_project_reanalysis
    DB_info: Database: dbSNP_ss ss 539171802
    Status: Live
  Affects: Gene: WBGene00004347
    Transcript: Y38E10A.21a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y38E10A.21a.1:c.514-112G>C
        Intron_number: 6/7
      Y38E10A.21d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y38E10A.21d.1:c.790-112G>C
        Intron_number: 8/8
      Y38E10A.21b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y38E10A.21b.1:c.394-112G>C
        Intron_number: 4/4
      Y38E10A.21c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y38E10A.21c.1:c.586-112G>C
        Intron_number: 6/7
  Reference: WBPaper00037807
  Method: WGS_De_Bono