WormBase Tree Display for Variation: WBVar01332390
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| WBVar01332390 | Evidence | Paper_evidence | WBPaper00037807 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | WBVar01332390 | |||||
| Other_name | cewivar00332547 | ||||||
| C05B5.7a.1:c.*98+61A>G | |||||||
| C05B5.7b.1:c.601-166A>G | |||||||
| C05B5.7a.2:c.*159A>G | |||||||
| HGVSg | CHROMOSOME_III:g.10014902T>C | ||||||
| Sequence_details | SMap | S_parent | Sequence | C05B5 | |||
| Flanking_sequences | AGTACTTTTGCATATTAGTTACACATATGAATTTGATTTAAAAAAAAAAT | AAAGCTGCACTGATCTGAATATTTAAAAAATCGTTTACATATTTTCAATC | |||||
| Mapping_target | C05B5 | ||||||
| Type_of_mutation | Substitution | t | C | Paper_evidence | WBPaper00037807 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | SNP | ||||||
| Natural_variant | |||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | ||||
| WBStrain00006631 | From_analysis | Million_mutation_project_reanalysis | |||||
| WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | |||||
| WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | |||||
| WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||||
| WGS_De_Bono | |||||||
| WBStrain00023018 | From_analysis | Million_mutation_project_reanalysis | |||||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||||
| WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | |||||
| WBStrain00023192 | From_analysis | Million_mutation_project_reanalysis | |||||
| WBStrain00024204 | From_analysis | Million_mutation_project_reanalysis | |||||
| Laboratory | AX | ||||||
| Analysis | WGS_De_Bono | ||||||
| Million_mutation_project_reanalysis | |||||||
| DB_info | Database | dbSNP_ss | ss | 539187431 | |||
| Status | Live | ||||||
| Affects | Gene | WBGene00004344 | |||||
| Transcript | C05B5.7a.2 | VEP_consequence | 3_prime_UTR_variant | ||||
| VEP_impact | MODIFIER | ||||||
| HGVSc | C05B5.7a.2:c.*159A>G | ||||||
| cDNA_position | 765 | ||||||
| Exon_number | 5/5 | ||||||
| C05B5.7a.1 | VEP_consequence | intron_variant | |||||
| VEP_impact | MODIFIER | ||||||
| HGVSc | C05B5.7a.1:c.*98+61A>G | ||||||
| Intron_number | 6/6 | ||||||
| C05B5.7b.1 | VEP_consequence | intron_variant | |||||
| VEP_impact | MODIFIER | ||||||
| HGVSc | C05B5.7b.1:c.601-166A>G | ||||||
| Intron_number | 2/2 | ||||||
| Reference | WBPaper00037807 | ||||||
| Method | WGS_De_Bono |
